Andre Hudson

College of Art and Design College of Engineering Technology College of Health Sciences and Technology College of Liberal Arts College of Science Golisano College of Computing and Information Sciences International Campuses Kate Gleason College of Engineering National Technical Institute for the Deaf School of Individualized Study

Andre Hudson

Professor
College of Science
Thomas H. Gosnell School of Life Sciences
Color Science

2018 Submissions

Journal Paper

Babbitt, Hudson, et al. "Synonymous Codon Organization Reduces the Impact of Mutation on Nucleic Acid Molecular Dynamics." J. Mol. Evo. (2018): N/A. Web. *

AO, Parthasarathy, et al. "A Three-ring Circus: Metabolism of the Three Proteogenic Aromatic Amino Acids and Their Role in the Health of Plants and Animals." Front Mol Biosci. (2018): N/A. Web. *

AO, Parthasarathy, et al. "Isolation and Genomic Characterization of Six Endophytic Bacteria Isolated from Saccharum sp (sugarcane): Insights into Antibiotic, Secondary Metabolite and Quorum Sensing Metabolism." Journal of Genomics 6. (2018): 117-121. Web. *

AO, Parthasarathy, et al. "Whole Genome Sequencing and Annotation of Exiguobacterium sp. RIT 452, an Antibiotic Producing Strain Isolated from a Pond Located on the Campus of the Rochester Institute of Technology." Microbiol Resour Announc. (2018): N/A. Web. *

2017 Submissions

Journal Paper

Hudson, Andre O, et al. "Dihydrodipicolinate Synthase: Structure, Dynamics, Function, and Evolution." Macromolecular Protein Complexes. (2017): 271-289. Print. *

Gan, Han M, et al. "Whole Genome Sequencing of Rhodotorula mucilaginosa Isolated from the Chewing Stick (Distemonanthus benthamianus): Insights into Rhodotorula Phylogeny, Mitogenome Dynamics and Carotenoid Biosynthesis." PeerJ. (2017): 1-18. Web. *

Kumar, HKS, et al. "Genomic Characterization of Eight Ensifer Strain Isolated from Pristine Caves and a Whole Genome Phylogeny of Ensifer (Sinorhizobium)." Journal of Genomics 5. (2017): 12-17. Print. £

Gan, Han M, et al. "Whole Genome of Salmonella enterica subsp. enterica Serovar Typhimurium Strains TT6675 and TT9097 Employed in the Isolation and Characterization of a Novel Giant Phage Mutant Collection." Genome Announcements 5. 34 (2017): 1-2. Web. £

Book Chapter

Hudson, Andre O, et al. "Lysine Synthesis in Microorganisms." The Handbook of Microbial Metabolism of Amino Acids. Edinburgh, UK: CAB International, 2017. 49-69. Print. £

2014 Submissions

Journal Paper

Gan, HM, et al. "Whole Genome Sequencing and Analysis Reveal Insights Into The Genetic Structure, Diversity And Evolutionary Relatedness Of Luxi And Luxr Homologs in Bacteria Belonging the Sphingomonadaceae Family." Frontiers in Cellular and Infection Microbiology 4. 188 (2014) Web. *

Gan, HY, et al. "Whole Genome Sequences of Four Oligotrophic Bacteria Isolated From Deep Within a Cave (>400 M): Lechuguilla Cave, New Mexico." Genome Announcements 2. 6 (2014): 0. Web. *

Babbitt, GA, et al. "Synonymous Codon Bias and Functional Constraint on GC3-related DNA Backbone Dynamics in the Prokaryotic Nucleoid." Nucleic Acids Research 42. 17 (2914): 10915-10926. Print. *

Triassi, AJ, et al. "A Putative Target for the Development of Narrow–Spectrum Antibacterial Compounds." Frontiers in Microbiology 5. (2014): 509. Web. ˜

HY, Gan,, et al. "Whole Genome Sequences of Thirteen Endophytic Bacteria Isolated Fom Shrub Willow (Salix) Grown in Geneva, New York." Genome Announc. 2. 3 (2014): 0. Web. *

MR, Oliver,, et al. "The Purification, Crystallization and Preliminary X-ray Diffraction Analysis of Two Isoforms of Meso-diaminopimelate Decarboxylase From Arabidopsis Thaliana." Acta Cryst F 70. (2014): 663-668. Print. *

HM, Gan,, et al. "High Quality Whole Genome Sequences of Three Strains of Enterobacter sp. Isolated from Jamaican Dioscorea Cayenensis (Yellow Yam)." Genome Announc. 13. 2 (2014): 0. Web. *

2013 Submissions

Journal Paper

Hudson, Andre O, et al. "Differential Response of Orthologous L,L-diaminopimelate Aminotransferase (DapL) to Enzyme Inhibitory Antibiotic Lead Compounds." Bioorganic and Medicinal Chemistry. (2013): 10.1016/j.bmc.2013.10.055. Print. *

Gan, HM, et al. "Comparative Genomic Analysis of Six Bacteria Belonging to the Genus Novosphingobium: Insights into Host Interactions, Marine Adaptation and Bioremediation." BMC Genomics 14. 431 (2013): doi:10.1186/1471-2164-14-431. Web. *

Hudson, Andre O, et al. "Biochemical Characterization of UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl:meso-2,6-diaminopimelate ligase (MurE) from Verrucomicrobium spinosum DSM 4136T." PloS ONE 8. 6 (2013): e66458.doi:10.1371/journal.pone.0066458. Web. *

Invited Keynote/Presentation

Hudson, Andre O. "L,L-diaminopimelate aminotransferase (DapL): A Novel Enzyme Involved in Peptidoglycan Biosynthesis." The Great Wall Symposium. Pasteur Institute. Paris, France. 23-25 Sep. 2013. Conference Presentation.

Hudson, Andre O. "Structure-activity Relationships Among the Mur ligase Family." The Great Wall Symposium. Pasteur Institute. Paris, France. 23-25 Sep. 2013. Conference Presentation.

Gan, H.M., et al. "Predictable Ecological Niches of Origin Revealed by Comparative Genomics of Six Novosphingobium Species." American Society for Microbiology. ASM. Denver, CO. 18-21 May 2013. Conference Presentation.

Hudson, Andre O. "Targeting the Essential Amino Acid Biosynthesis Pathways for the Discovery of Novel Antibiotics." East Carolina State University. Greenville, NC. 2 Oct. 2013. Lecture.

Hudson, Andre O. "L,L-diaminopimelate aminotransferase (DapL): A Novel Enzyme Involved in Peptidoglycan Biosynthesis." The Great Wall Symposium. Pasteur Institute. Paris, France. 23 Sep. 2013. Address.

2012 Submissions

Journal Paper

Hudson, Andre, et al. "Whole Genome Sequence of Enterobacter sp. SST3, an Endophyte Isolated from Jamaica Sugarcane (Saccharum sp) Stalk Tissue." Journal of Bacteriology 194. (2012): 5981-598. Print.

Hudson, Andre, et al. "Genome Sequence of Novosphingobium sp. Strain Rr02-17, a Nopaline Crown Gall Associated Bacterium Isolated from Vitis vinifera L. Grapevine." Journal of Bacteriology 194. (2012): 5137-5138. Print.

Hudson, Andre. "Genome Sequence of Methylobacterium sp. Strain GXF4, a Xylem Associated Bacterium Isolated from Vitis Vinifera L. Grapevine." Journal of Bacteriology 194. (2012): 5157-5158. Print.

Hudson, Andre, et al. "Genomic and Biochemical Analysis of the Diaminopimelate and Lysine Biosynthesis Pathway in Verrucomicrobium Spinosum." Frontiers in Microbiology 183. 3 (2012): 3389. Print.

Published Conference Proceedings

Hudson, Andre, et al. "Genomic and Biochemical Analysis of the Diaminopimelate/Lysine Synthesis Pathway in Verrucomicrobium Spinosum." Proceedings of the American Society for Microbiology. Ed. American Society for Microbiology. San Francisco, CA: American Society for Microbiology, 2012. Print.

2011 Submissions

Journal Paper

Hudson, A.O., I. Giron, and R. Dobson. "Crystallization and Preliminary X-ray Diffraction Analysis of L,L-diaminopimelate Aminotransferase (DapL) from Chlamydomonas Reinhardtii." Acta Cryst F67. (2011): 140-143. Print. *

Hudson, A.O., et al. "Dual Diaminopimelate Biosynthesis Pathways in Bacteroides Fragilis and Clostridium." BBA proteins and proteomics 1814. (2011): 1162-1168. Print. *

Hudson, A.O., I. Giron, and R. Dobson. "L,L-Diaminopimelate Aminotransferase from Chlamydomonas Reinhardtii: A Target for Algaecide Development." PLoS ONE 6. 5 (2011): 1-12. Web. *

Bulman, Z., et al. "A Novel Property of Propolis (bee glue): Anti-pathogenic activity by Inhibition of N-acyl-homoserine Lactone Mediated Signaling in Bacteria." Journal of Ethanopharmacology 138. (2011): 788-797. Print. *

Book Chapter

Hudson, A.O. and M.A. Savka. "Bioluminescence Biosensor Strains for Detection of Quorum Sensing N-acyl-homoserine Lactone Signal Molecules." Bioluminescence. U.S.A.: Nova Publishers, 2011. 747-3. Print. £