Faculty Scholarship 2019

Thomas H. Gosnell School of Life Sciences

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Gregory Babbitt

Associate Professor
Thomas H. Gosnell School of Life Sciences
College of Science

2019 Submissions

Published Game, Application or Software

GA, Babbitt. DROIDS 3.0 - software for comparative protein dynamics. Software. https://github.com/gbabbitt/DROIDS-3.0-comparative-protein-dynamics. 2019.

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Eli Borrego

Assistant Professor
Thomas H. Gosnell School of Life Sciences
College of Science

2019 Submissions

Journal Paper

Jochum, Michael D, et al. "Bioprospecting Plant Growth-promoting Rhizobacteria that Mitigate Drought Stress in Grasses." Frontiers in Microbiology 10. (2019): 2106. Web. *

Lei, Jiaxin, et al. "CIRCADIAN CLOCK-ASSOCIATED 1 Controls Resistance to Aphids by Altering Indole Glucosinolate Production." Plant Physiology 181. 3 (2019): 1344-359. Print. *

Dai, Yanwan, et al. "Rosette Core Fungal Resistance in Arabidopsis Thaliana." Planta 250. 6 (2019): 1941-1953. Print. *

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Sandra Connelly

Principal Lecturer
Thomas H. Gosnell School of Life Sciences
College of Science

2019 Submissions

Journal Paper

Moore, Elizabeth, et al. "Cascading Ecological Impacts of Fullerenes in Freshwater Ecosystems." Environmental Toxicology 38. 8 (2019): 1714-1723. Print. *

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Feng Cui

Associate Professor
Thomas H. Gosnell School of Life Sciences
College of Science

2019 Submissions

Journal Paper

Zhang, Jimmy F., et al. "BioVR: a platform for virtual reality assisted biological data integration and visualization." BMC Bioinformatics 20. (2019): 78. Web. *

KC, Kishan, et al. "GNE: a deep learning framework for gene network inference by aggregating biological information." BMC Systems Biology 13. (2019): 38. Web. *

Wright, Gregory M and Feng Cui. "The nucleosome position-encoding WW/SS sequence pattern is depleted in mammalian genes relative to other eukaryotes." Nucleic Acids Research 47. 15 (2019): 7942–7954. Print. *

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Maureen Ferran

Professor
Thomas H. Gosnell School of Life Sciences
College of Science

2019 Submissions

Journal Paper

Russell, Thomas M, et al. "Near-Complete Genome Sequences of Vesicular Stomatitis Virus Indiana Laboratory Strains HR and T1026R1 and Plaque Isolates 22-20 and 22-25." Microbiology Resoure Announcement. 8. 14 (2019): 1-2. Print. *

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Jeyhan Kartaltepe

Associate Professor
School of Physics and Astronomy, Thomas H. Gosnell School of Life Sciences
College of Science

2019 Submissions

Journal Paper

Betti, S., et al. "Environmental Effect on ISM Mass in Galaxies Across the Cosmic Web at z~0.7." The Astrophysical Journal 874. 53 (2019): 1-. Web. £

Iyer, K., et al. "Non-Parametric Star Formation History Reconstruction with Gaussian Processes I: Counting Major Episodes of Star Formation." The Astrophysical Journal 879. 116 (2019): 1-. Web. £

Duncan, K., et al. "Observational Constraints on the Merger History of Galaxies since z~6: Probabilistic Galaxy Pair Counts in the CANDELS Fields." The Astrophysical Journal 876. 110 (2019): 1-. Web. £

Casey, C., et al. "Physical Characterization of an Unlensed Dusty Star-Forming Galaxy at z=5.85." The Astrophysical Journal 887. 44 (2019): 1-. Web. £

Jimenez-Andrade, E., et al. "Radio Continuum Size Evolution of Star-Forming Galaxies over 0.35 < z < 2.25." Astronomy & Astrophysics 625. 114 (2019): 1-. Web. £

Farrah, D., et al., including, and Kartaltepe, Jeyhan S. "Review: Far-Infrared Instrumentation and Technology Development for the Next Decade." Journal of Astronomical Telescopes, Instruments, and Systems 5. 20901 (2019): 1-. Web. £

Cooke, Kevin, et al. "Stellar Mass Growth of Brightest Cluster Galaxy Progenitors in COSMOS Since z~3,." The Astrophysical Journal 881. 150 (2019): 1-. Web. £

Kashino, D., et al. "The FMOS-COSMOS Survey of Star-Forming Galaxies at z~1.6 VI: Redshift and Emission-Line Catalog and Basic Properties of Star-Forming Galaxies." The Astrophysical Journal 241. 10 (2019): 1-. Web. £

Silverman, J., et al. "Where do Quasar Hosts Lie with Respect to the Size-Mass Relation of Galaxies." The Astrophysical Journal 887. 55 (2019): 1-. Web. £

Invited Paper

Papovich, C., et al. "UV Diagnostics of Galaxies from the Peak of Star-Formation to the Epoch of Reionization." Bulletin of the American Astronomical Society, 51, 266. (2019). Web.

Finkelstein, S., et al. "Unveiling the Phase Transition of the Universe During the Reionization Epoch with Lyman-alpha." Bulletin of the American Astronomical Society, 51, 221. (2019). Web.

Koekemoer, A., et al. "Ultra Deep Field Science with WFIRST." Bulletin of the American Astronomical Society, 51, 550. (2019). Web.

Norman, D., et al. "The Growing Importance of a Tech Savvy Astronomy and Astrophysics Workforce." Bulletin of the American Astronomical Society, 51, 18. (2019). Web.

Casey, C., et al. "Taking Census of Massive, Star-Forming Galaxies Formed <1 Gyr After the Big Bang." Bulletin of the American Astronomical Society, 51, 212. (2019). Web.

Tollerud, E., et al. "Sustaining Community-Driven Software for Astronomy in the 2020s." Bulletin of the American Astronomical Society, 51, 180. (2019). Web.

Ravindranath, S., et al. "Spatially-Resolved Studies of Star-Forming Galaxies in the Reionization epoch." Bulletin of the American Astronomical Society, 51, 500. (2019). Web.

Newman, A., et al. "Resolving Galaxy Formation at Cosmic Noon." Bulletin of the American Astronomical Society, 51, 145. (2019). Web.

Dickinson, M., et al. "Observing Galaxy Evolution in the Context of Large-Scale Structure." Bulletin of the American Astronomical Society, 51, 538. (2019). Web.

Smith, A., et al. "Elevating the Role of Software as a Product of the Research Enterprise." Bulletin of the American Astronomical Society, 51, 52. (2019). Web.

Koss, M., et al., including, and Kartaltepe, Jeyhan S. "Black Hole Growth in Mergers and Dual AGN." Bulletin of the American Astronomical Society, 51, 504. (2019). Web.

Kartaltepe, Jeyhan S. and et al. "Assembly of the Most Massive Clusters at Cosmic Noon." Bulletin of the American Astronomical Society, 51, 395. (2019). Web.

Invited Keynote/Presentation

Kartaltepe, Jeyhan. "The Impact of Galaxy Mergers on the Evolution of Galaxies Over Cosmic Time." From AGN to Starburst: A Multiwavelength Synergy. N/A. Guiyang, China. 15 Aug. 2019. Conference Presentation.

Kartaltepe, Jeyhan. "Future Prospects with JWST Observations." IGC@25 meeting: The Multimessenger Universe. Penn State University. State College, PA. 26 Jun. 2019. Conference Presentation.

Kartaltepe, Jeyhan. "How Cosmic Collisions Shaped the Universe." Torch Club of Rochester Banquet. Torch Club of Rochester. Rochester, NY. 12 Feb. 2019. Keynote Speech.

Kartaltepe, Jeyhan. "The Role of Mergers in Galaxy Evolution Over Cosmic Time." Colloquium. Tufts University. Medford, MA. 27 Sep. 2019. Guest Lecture.

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Aaron McGowan

Principal Lecturer
School of Physics and Astronomy, Thomas H. Gosnell School of Life Sciences
College of Science

2019 Submissions

Journal Paper

Valencia, E. and et al. (MINERvA Collaboration). "Constraint of the MINERνA Medium Energy Neutrino Flux Using Neutrino-electron Elastic Scattering." Physical Review D 100. 9 (2019): 92001. Print. *

Le, T. and et al. (MINERvA Collaboration). "Measurement of νμ Charged-current Single π− Production on Hydrocarbon in the few-GeV Region Using MINERvA." Physical Review D 100. 5 (2019): 52008. Print. *

Elkins, M. and et al. (MINERvA Collaboration). "Neutron Measurements from Antineutrino Hydrocarbon Reactions." Physical Review D 100. 5 (2019): 52002. Print. *

Ruterbories, D. "Measurement of Quasielastic-like Neutrino Scattering at ⟨Eν⟩∼3.5  GeV on a Hydrocarbon Target." Physical Review D 99. 1 (2019): 12004. Print. *

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Dina Newman

Professor
Thomas H. Gosnell School of Life Sciences
College of Science

2019 Submissions

Journal Paper

Donahue, Callie J., et al. "A Close-up Look at PCR." CourseSource 6. (2019): 1-8. Web. *

Book Chapter

Terrell, Cassidy R., et al. "Physical Models Support Active Learning as Effective Thinking Tools." Biochemistry Education: From Theory to Practice. Ed. Thomas J. Bussey, Kimberly Linenberger Cortes, and Rodney C. Austin. Washington, DC: American Chemical Society, 2019. 43-62. Web. *

Invited Keynote/Presentation

Newman, Dina L. "Models for Teaching and Learning about DNA." American Society of Human Genetics Annual Meeting. American Society of Human Genetics. Houston, TX. 16 Oct. 2019. Conference Presentation. ∆

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Susan Smith

Associate Professor
Thomas H. Gosnell School of Life Sciences
College of Science

2019 Submissions

Journal Paper

Ross, Annemarie D., et al. "Assessment of Climate Science Knowledge and Perceptions of Deaf and Hard-of-Hearing Students." Journal of Science Education for Students with Disabilities 22. 1 (2019): article 8. Web. «

Journal Editor

Pagano, Susan Smith, ed. Condor: Ornithological Applications. Chicago, IL: American Ornithological Society, 2019. Print.

Pagano, Susan Smith, ed. Northeastern Naturalist. Steuben, ME: Eagle Hill Institute, 2019. Print.

Invited Keynote/Presentation

Pagano, Susan Smith. "Native Fruiting Plants for Migratory Bird Nutrition." Turning a New Leaf Conference. Chesapeake Conservation Landscaping Council. Harrisburg, PA. 6 Dec. 2019. Conference Presentation.

Pagano, Susan Smith. "Native Berries for Migratory Birds: A Nutritional Perspective." Cullowhee Native Plant Conference. Western Carolina University. Cullowhee, NC. 18 Jul. 2019. Conference Presentation.

Pagano, Susan Smith. "Native Plants and Migratory Birds: A ‘Fruit-full’ Pairing." GardenWise. Penn State Extension. York, PA. 9 Mar. 2019. Conference Presentation.

Pagano, Susan Smith. "Native Berries for Migratory Birds." Meeting of the Genesee Valley Audubon Society. Genesee Valley Audubon Society. Rochester, NY. 25 Feb. 2019. Lecture.

Moleski, Carter, Gretchen Horst, and Susan Smith Pagano. "A Molecular Sexing Protocol Optimized for Migratory Passerines." 96th Meeting of the Eastern Bird Banding Association. Eastern Bird Banding Association. Rochester, NY. 13 Apr. 2019. Conference Presentation. ˜

Horst, Gretchen, et al. "Invasive Honeysuckle’s Impact on Avian Frugivores: Insights from Feather Reflectance and Nutritional Biochemistry." 96th Meeting of the Eastern Bird Banding Association. Eastern Bird Banding Association. Rochester, NY. 13 Apr. 2019. Conference Presentation. ˜

Border, Molly, et al. "Does Japanese Barberry Affect the Physiological Condition of Breeding Male Ovenbirds." 96th Meeting of the Eastern Bird Banding Association. Eastern Bird Banding Association. Rochester, NY. 13 Apr. 2019. Conference Presentation. ˜

Pagano, Susan Smith, Annemarie D. Ross, and Todd Pagano. "Integrating Biology and Chemistry in an Outdoor Ornithology Learning Environment." 137th Annual Meeting of the American Ornithological Society. American Ornithological Society. Anchorage, AK. 27 Jun. 2019. Conference Presentation. ˜

Pagano, Susan Smith, et al. "Exploring the Physiological Condition of Migratory Songbirds Near Lake Ontario: New Insights from Gut Microbiota." 137th Annual Meeting of the American Ornithological Society. American Ornithological Society. Anchorage, AK. 26 Jun. 2019. Conference Presentation. ˜

Rosete, Jenifer, et al. "The Nutritional Quality of Native and Invasive Berries for Migratory Birds." 46th Annual Rochester Academy of Science Fall Scientific Paper Session. Rochester Academy of Science. Rochester, NY. 9 Nov. 2019. Conference Presentation. ˜

Delles, Erica, et al. "Physiological Condition in Relation to Molecular Sex of Thrushes During Migration Stopover Near Lake Ontario." 46th Annual Rochester Academy of Science Fall Scientific Paper Session. Rochester Academy of Science. Rochester, NY. 9 Nov. 2019. Conference Presentation. ˜

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Hyla Sweet

Associate Professor
Thomas H. Gosnell School of Life Sciences
College of Science

2019 Submissions

Journal Paper

Sweet, Hyla C., et al. "Abbreviated Development of the Brooding Brittle Star Ophioplocus esmarki." The Biological Bulletin 236. (2019): 75–87. Print. *

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Julie Thomas

Associate Professor
Thomas H. Gosnell School of Life Sciences
College of Science

2019 Submissions

Journal Paper

Weintraub, S. T., et al. "Global Proteomic Profiling of Salmonella Infection by a Giant Phage." Journal of Virology 93. 5 (2019): e01833-18. Print. *

Peña, Adriana Coll De, et al. "Analysis of bacteriophages with insulator-based dielectrophoresis." Micromachines 10. 7 (2019): 450. Web. *

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Anna Tyler

Professor
Thomas H. Gosnell School of Life Sciences
College of Science

2019 Submissions

Journal Paper

Badura, G.P., et al. "A Novel Approach for Deriving LAI of Salt Marsh Vegetation Using Structure from Motion and Multi-Angular Spectra." IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing. (2019): 1-15. Print. *

Eon, R., et al. "Retrieval of Sediment Filling Factor in a Salt Panne from Multi-View Hyperspectral Imagery." Remote Sensing 12. (2020): 422. Web. *

Parthsarathy, A., et al. "Plastic pollution in aquatic and terrestrial environments: Is this a driver for the transmission of pathogens and the evolution of antibiotic resistance?" Environmental Science and Technology 53. (2019): 1744-1745. Print. *

Moore, E.A., et al. "Cascading Ecological Impacts of Fullerenes in Freshwater Ecosystems." Environmental Toxicology and Chemistry 38. (2019): 1714-1723. Print. *

Ponte, S., et al. "Fullerene toxicity in the benthos with implications for freshwater ecosystem services." Science of the Total Environment 687. (2019): 451-459. Print. *

Eon, R., et al. "Retrieval of salt marsh above-ground biomass from high-spatial resolution, multi-view hyperspectral imagery using PROSAIL." Remote Sensing 11. (2019): 1385. Web. *

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Crista Wadsworth

Assistant Professor
Thomas H. Gosnell School of Life Sciences
College of Science

2019 Submissions

Journal Paper

Kozak, Genevieve M, et al. "Genomic basis of circannual rhythm in the European corn borer moth." Current Biology 29. (2019): 3501-3509. Print.

Wadsworth, Crista B, et al. "Impact of Species Diversity on the Design of RNA-Based Diagnostics for Antibiotic Resistance in Neisseria gonorrhoeae." Antimicrobial Agents and Chemotherapy 63. 8 (2019): e00549-19. Print.

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Leslie Kate Wright

Professor
Thomas H. Gosnell School of Life Sciences
College of Science

2019 Submissions

Journal Paper

Kim, Thomas, L. Kate Wright, and Kathryn Miller. "An Examination of Students’ Perceptions of the Kekule´ resonance representation using a perceptual learning theory lens." Chemistry Education Research and Practice 10.1039/C9RP00009G. (2019): 1-8. Web. *

Donahue, Callie, et al. "A Close-up Look at PCR." CourseSource 6. (2019): 1-8. Web. *

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